STRINGSTRING
RSAG_01562 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01562" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01562Uncharacterized protein (627 aa)    
Predicted Functional Partners:
RSAG_01563
Uncharacterized protein (577 aa)
 
       
0.890
RSAG_01564
Uncharacterized protein (155 aa)
 
          0.887
RSAG_02004
Uncharacterized protein (281 aa)
   
  0.750
RSAG_01438
Uncharacterized protein (223 aa)
 
  0.727
RSAG_01256
Uncharacterized protein (233 aa)
 
  0.727
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
   
  0.725
RSAG_02316
Uncharacterized protein (290 aa)
   
0.718
RSAG_01607
Lantibiotic protection ABC transporter, ATP-binding subunit (234 aa)
 
 
  0.717
RSAG_00898
Uncharacterized protein (263 aa)
   
0.712
RSAG_00497
Uncharacterized protein (300 aa)
     
  0.710
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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