STRINGSTRING
RSAG_01569 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01569" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01569Uncharacterized protein (143 aa)    
Predicted Functional Partners:
RSAG_01570
Thiazole biosynthesis adenylyltransferase ThiF (278 aa)
 
 
  0.963
RSAG_01571
Thiamine biosynthesis protein ThiS (68 aa)
 
          0.949
RSAG_01574
Uncharacterized protein (289 aa)
 
          0.939
RSAG_01573
Uncharacterized protein (83 aa)
 
          0.937
RSAG_01176
Exonuclease SbcCD, D subunit (1275 aa)
     
    0.875
rpsG
30S ribosomal protein S7 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (171 aa)
     
    0.809
RSAG_01572
Thioredoxin (105 aa)
   
      0.716
rpsS
30S ribosomal protein S19 ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (93 aa)
     
    0.712
RSAG_02897
Uncharacterized protein (671 aa)
   
    0.707
RSAG_03470
Uncharacterized protein (441 aa)
     
    0.697
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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