STRINGSTRING
RSAG_01579 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01579" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01579Uncharacterized protein (106 aa)    
Predicted Functional Partners:
RSAG_01580
Uncharacterized protein (257 aa)
 
          0.799
RSAG_02682
Uncharacterized protein (503 aa)
 
   
    0.716
RSAG_01577
Uncharacterized protein (103 aa)
   
        0.614
recG
ATP-dependent DNA helicase RecG ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (684 aa)
         
    0.606
RSAG_00260
Uncharacterized protein (393 aa)
 
        0.605
RSAG_01578
Uncharacterized protein (110 aa)
              0.604
RSAG_00261
Uncharacterized protein (510 aa)
 
        0.587
RSAG_04531
Uncharacterized protein (227 aa)
              0.560
RSAG_00827
Uncharacterized protein (131 aa)
   
          0.452
RSAG_00324
Uncharacterized protein (2587 aa)
              0.441
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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