STRINGSTRING
RSAG_01620 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01620" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01620Uncharacterized protein (347 aa)    
Predicted Functional Partners:
RSAG_01621
V-type ATP synthase subunit I (646 aa)
 
          0.937
RSAG_01623
Uncharacterized protein (102 aa)
 
          0.919
RSAG_01622
Uncharacterized protein (143 aa)
 
          0.919
RSAG_01627
V-ATPase subunit D ; Produces ATP from ADP in the presence of a proton gradient across the membrane (205 aa)
 
          0.895
RSAG_01624
Uncharacterized protein (195 aa)
 
          0.844
RSAG_01625
V-ATPase subunit A ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit (590 aa)
 
          0.831
RSAG_01626
V-ATPase subunit B ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit (460 aa)
 
          0.740
RSAG_01619
Uncharacterized protein (103 aa)
              0.709
RSAG_00589
Uncharacterized protein (385 aa)
   
          0.595
RSAG_00769
Stage III sporulation protein AB (172 aa)
   
          0.500
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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