STRINGSTRING
RSAG_01701 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01701" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01701Uncharacterized protein (444 aa)    
Predicted Functional Partners:
RSAG_01702
Uncharacterized protein (666 aa)
              0.546
RSAG_02887
Phosphoribosylformylglycinamidine synthase (1254 aa)
   
   
  0.517
RSAG_01700
MATE efflux family protein (466 aa)
   
        0.477
RSAG_03040
Riboflavin biosynthesis protein (299 aa)
   
        0.447
argC
N-acetyl-glutamate semialdehyde dehydrogenase (351 aa)
              0.438
hemL
Glutamate-1-semialdehyde aminotransferase (425 aa)
              0.438
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (324 aa)
              0.424
RSAG_03266
L-threonylcarbamoyladenylate synthase ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (350 aa)
   
        0.410
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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