STRINGSTRING
RSAG_01707 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01707" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01707Uncharacterized protein (137 aa)    
Predicted Functional Partners:
RSAG_01706
DNA repair protein radA ; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (458 aa)
              0.879
RSAG_03173
Uncharacterized protein (121 aa)
   
          0.777
RSAG_01727
Uncharacterized protein (173 aa)
   
          0.776
RSAG_02945
Uncharacterized protein (85 aa)
   
          0.765
RSAG_02628
Uncharacterized protein (415 aa)
   
          0.764
RSAG_02137
Uncharacterized protein (365 aa)
   
          0.758
RSAG_00847
Uncharacterized protein (409 aa)
   
          0.756
RSAG_02656
Uncharacterized protein (813 aa)
   
          0.754
RSAG_01401
Uncharacterized protein (90 aa)
   
          0.750
RSAG_04566
Uncharacterized protein (672 aa)
 
          0.747
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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