STRINGSTRING
RSAG_01709 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01709" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01709Uncharacterized protein (135 aa)    
Predicted Functional Partners:
RSAG_01708
Uncharacterized protein (820 aa)
              0.859
RSAG_01707
Uncharacterized protein (137 aa)
 
          0.591
RSAG_00497
Uncharacterized protein (300 aa)
 
     
  0.560
RSAG_01710
Uncharacterized protein (256 aa)
              0.539
RSAG_02004
Uncharacterized protein (281 aa)
 
     
  0.525
RSAG_02316
Uncharacterized protein (290 aa)
 
     
  0.521
RSAG_01706
DNA repair protein radA ; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (458 aa)
              0.503
RSAG_03317
Uncharacterized protein (357 aa)
         
  0.445
RSAG_02256
Uncharacterized protein (280 aa)
         
  0.445
RSAG_02022
Uncharacterized protein (320 aa)
         
  0.445
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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