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fucI protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"fucI" - 6-deoxy-L-galactose isomerase in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucI6-deoxy-L-galactose isomerase ; Converts the aldose L-fucose into the corresponding ketose L-fuculose (598 aa)    
Predicted Functional Partners:
RSAG_03510
Uncharacterized protein (147 aa)
 
 
  0.961
RSAG_01755
Rhamnulokinase (466 aa)
 
 
  0.936
RSAG_03387
Xylulokinase (485 aa)
   
 
  0.831
RSAG_03402
Uncharacterized protein (534 aa)
   
 
  0.787
RSAG_00350
Uncharacterized protein (324 aa)
       
    0.748
RSAG_01756
Uncharacterized protein (361 aa)
 
          0.736
RSAG_01778
L-ribulose-5-phosphate 4-epimerase (287 aa)
 
   
  0.696
RSAG_01978
Uncharacterized protein (314 aa)
       
    0.610
RSAG_02736
Uncharacterized protein (292 aa)
       
    0.607
RSAG_02284
Uncharacterized protein (370 aa)
       
    0.607
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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