STRINGSTRING
RSAG_01788 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01788" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01788Uncharacterized protein (468 aa)    
Predicted Functional Partners:
RSAG_00528
Uncharacterized protein (254 aa)
       
  0.637
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (467 aa)
       
  0.631
RSAG_03261
N-acetylmuramoyl-L-alanine amidase CwlD (223 aa)
       
  0.630
RSAG_03137
Uncharacterized protein (322 aa)
       
  0.630
RSAG_01493
Uncharacterized protein (337 aa)
       
  0.630
RSAG_03131
Uncharacterized protein (516 aa)
         
  0.604
RSAG_04563
Uncharacterized protein (453 aa)
         
  0.558
RSAG_02280
Uncharacterized protein (806 aa)
         
  0.558
RSAG_01841
Uncharacterized protein (706 aa)
         
  0.558
RSAG_01421
Uncharacterized protein (921 aa)
         
  0.558
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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