STRINGSTRING
RSAG_01807 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01807" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01807Uncharacterized protein (305 aa)    
Predicted Functional Partners:
RSAG_01805
Uncharacterized protein (248 aa)
 
          0.938
RSAG_01806
Uncharacterized protein (210 aa)
 
          0.933
RSAG_01808
No annotation available (56 aa)
              0.517
RSAG_02592
CRISPR-associated helicase cas3 (850 aa)
              0.438
RSAG_02591
CRISPR-associated endonuclease cas1 (120 aa)
              0.438
RSAG_00863
Uncharacterized protein (302 aa)
              0.438
cas1
CRISPR-associated endonuclease Cas1 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (333 aa)
              0.438
RSAG_01578
Uncharacterized protein (110 aa)
   
          0.433
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (11%) [HD]