STRINGSTRING
RSAG_01825 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01825" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01825Uncharacterized protein (315 aa)    
Predicted Functional Partners:
RSAG_01824
23S rRNA (Uracil-5-)-methyltransferase RumA (545 aa)
              0.885
RSAG_01826
Uncharacterized protein (437 aa)
              0.728
RSAG_01823
Uncharacterized protein (116 aa)
 
          0.724
recU
Recombination protein U homolog ; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation (177 aa)
   
          0.612
RSAG_03173
Uncharacterized protein (121 aa)
   
          0.605
RSAG_01646
Methionine--tRNA ligase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (652 aa)
 
          0.550
RSAG_03123
Uncharacterized protein (153 aa)
   
          0.524
RSAG_01080
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (179 aa)
 
          0.512
RSAG_02652
Uncharacterized protein (350 aa)
         
  0.445
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa)
              0.442
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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