STRINGSTRING
RSAG_01875 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01875" - YegS//BmrU family lipid kinase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01875YegS//BmrU family lipid kinase (321 aa)    
Predicted Functional Partners:
RSAG_02936
Uncharacterized protein (241 aa)
     
  0.817
RSAG_02626
Uncharacterized protein (182 aa)
     
  0.817
RSAG_00717
Uncharacterized protein (227 aa)
     
  0.817
RSAG_00246
Uncharacterized protein (180 aa)
     
  0.817
thyA
Thymidylate synthase ; Provides the sole de novo source of dTMP for DNA biosynthesis (282 aa)
              0.686
groL
Protein Cpn60 ; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (539 aa)
 
   
    0.663
RSAG_03333
Uncharacterized protein (248 aa)
   
 
    0.618
RSAG_03321
Uncharacterized protein (317 aa)
   
 
    0.618
RSAG_02493
Uncharacterized protein (260 aa)
   
 
    0.618
RSAG_03284
1-acyl-sn-glycerol-3-phosphate acyltransferase (237 aa)
   
 
    0.616
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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