STRINGSTRING
RSAG_01948 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01948" - Chlorophyll synthesis pathway, bchC in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01948Chlorophyll synthesis pathway, bchC (338 aa)    
Predicted Functional Partners:
RSAG_03352
Uncharacterized protein (920 aa)
       
    0.982
RSAG_01777
Uncharacterized protein (462 aa)
   
  0.973
RSAG_01945
Uncharacterized protein (480 aa)
 
  0.947
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
  0.936
RSAG_03353
Uncharacterized protein (764 aa)
         
    0.900
RSAG_01949
Uncharacterized protein (337 aa)
   
 
  0.898
RSAG_01950
Uncharacterized protein (265 aa)
 
 
  0.898
RSAG_02173
Uncharacterized protein (625 aa)
   
 
  0.885
RSAG_00048
Uncharacterized protein (623 aa)
   
 
  0.885
RSAG_03387
Xylulokinase (485 aa)
 
 
  0.854
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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