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RSAG_01996 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01996" - Transcript cleavage factor GreA in Ruminococcus sp. 5139BFAA
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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RSAG_01996Transcript cleavage factor GreA ; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (166 aa)    
Predicted Functional Partners:
RSAG_01997
Small GTP-binding protein (900 aa)
     
 
  0.829
RSAG_03070
Uncharacterized protein (555 aa)
   
 
  0.762
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1251 aa)
   
 
 
  0.599
RSAG_01646
Methionine--tRNA ligase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (652 aa)
 
     
  0.598
RSAG_01228
DNA polymerase I (849 aa)
 
   
  0.590
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (273 aa)
     
 
  0.582
lysS
Lysyl-tRNA synthetase (678 aa)
 
     
  0.551
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
 
          0.531
RSAG_02104
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1071 aa)
     
 
  0.524
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
     
 
  0.511
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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