STRINGSTRING
RSAG_01998 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_01998" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_01998Uncharacterized protein (313 aa)    
Predicted Functional Partners:
RSAG_00764
Stage III sporulation protein AG (110 aa)
   
          0.758
RSAG_02464
Uncharacterized protein (145 aa)
   
          0.615
RSAG_01731
Uncharacterized protein (85 aa)
   
          0.568
RSAG_00599
Uncharacterized protein (605 aa)
   
          0.542
RSAG_01520
Uncharacterized protein (280 aa)
   
          0.511
RSAG_01997
Small GTP-binding protein (900 aa)
              0.478
RSAG_01078
Uncharacterized protein (90 aa)
   
          0.454
RSAG_01996
Transcript cleavage factor GreA ; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (166 aa)
              0.451
RSAG_04754
Uncharacterized protein (143 aa)
   
          0.437
RSAG_00657
No annotation available (143 aa)
   
          0.437
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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