STRINGSTRING
RSAG_02002 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02002" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02002Uncharacterized protein (356 aa)    
Predicted Functional Partners:
RSAG_02000
Uncharacterized protein (251 aa)
 
  0.995
RSAG_02001
Uncharacterized protein (361 aa)
 
  0.993
RSAG_00025
Uncharacterized protein (385 aa)
   
  0.905
RSAG_00024
Uncharacterized protein (339 aa)
 
  0.884
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (755 aa)
     
      0.862
RSAG_01080
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (179 aa)
       
      0.861
RSAG_03317
Uncharacterized protein (357 aa)
       
    0.552
RSAG_02316
Uncharacterized protein (290 aa)
       
    0.552
RSAG_02256
Uncharacterized protein (280 aa)
       
    0.552
RSAG_02022
Uncharacterized protein (320 aa)
       
    0.552
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (15%) [HD]