STRINGSTRING
RSAG_02106 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02106" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02106Uncharacterized protein (385 aa)    
Predicted Functional Partners:
RSAG_02107
Uncharacterized protein (501 aa)
 
       
0.630
RSAG_02129
Uncharacterized protein (116 aa)
   
          0.581
RSAG_02899
Uncharacterized protein (1018 aa)
   
          0.573
RSAG_00112
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)
   
   
  0.487
trmB
tRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (221 aa)
         
  0.476
RSAG_02130
Uncharacterized protein (112 aa)
   
          0.448
RSAG_02086
Uncharacterized protein (184 aa)
   
          0.445
RSAG_02735
Uncharacterized protein (252 aa)
   
          0.441
RSAG_01390
Uncharacterized protein (233 aa)
   
        0.430
RSAG_01288
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (299 aa)
   
        0.430
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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