STRINGSTRING
RSAG_02119 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02119" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02119Uncharacterized protein (847 aa)    
Predicted Functional Partners:
RSAG_02121
Uncharacterized protein (426 aa)
 
          0.941
RSAG_02120
Uncharacterized protein (730 aa)
          0.932
RSAG_02118
Uncharacterized protein (814 aa)
 
       
0.873
RSAG_02122
Transport permease protein (271 aa)
 
          0.843
RSAG_02117
Uncharacterized protein (480 aa)
              0.731
RSAG_02123
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
              0.677
RSAG_00390
Uncharacterized protein (246 aa)
 
          0.651
RSAG_02114
Uncharacterized protein (318 aa)
 
       
0.584
RSAG_00391
Transport permease protein (258 aa)
 
          0.561
RSAG_01010
dTDP-4-dehydrorhamnose reductase (304 aa)
 
          0.543
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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