STRINGSTRING
RSAG_02130 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02130" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02130Uncharacterized protein (112 aa)    
Predicted Functional Partners:
RSAG_02129
Uncharacterized protein (116 aa)
 
          0.972
RSAG_02127
Uncharacterized protein (320 aa)
 
          0.841
RSAG_02126
Uncharacterized protein (352 aa)
 
          0.818
RSAG_02128
Uncharacterized protein (311 aa)
              0.727
RSAG_00012
Uncharacterized protein (217 aa)
   
          0.697
RSAG_02654
Uncharacterized protein (801 aa)
   
          0.667
RSAG_00217
Uncharacterized protein (392 aa)
   
          0.651
RSAG_02120
Uncharacterized protein (730 aa)
 
          0.642
RSAG_02125
TDP-4-keto-6-deoxy-D-glucose transaminase (376 aa)
 
          0.639
RSAG_03264
Uncharacterized protein (752 aa)
   
          0.616
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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