STRINGSTRING
RSAG_02135 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02135" - TIGR00159 family protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02135TIGR00159 family protein (296 aa)    
Predicted Functional Partners:
RSAG_02134
Uncharacterized protein (440 aa)
   
  0.934
RSAG_02136
No annotation available (43 aa)
              0.859
RSAG_02133
HPr family phosphocarrier (87 aa)
              0.810
RSAG_02138
Uncharacterized protein (144 aa)
              0.733
RSAG_02137
Uncharacterized protein (365 aa)
              0.733
RSAG_03247
Uncharacterized protein (683 aa)
   
     
  0.718
mutS2
Endonuclease MutS2 ; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity (793 aa)
 
          0.640
murF
D-alanyl-D-alanine-adding enzyme ; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (456 aa)
 
          0.547
glmM
Phosphoglucosamine mutase ; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (448 aa)
         
  0.522
murB
UDP-N-acetylmuramate dehydrogenase ; Cell wall formation (306 aa)
 
          0.508
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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