STRINGSTRING
RSAG_02177 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02177" - ComEA protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02177ComEA protein (274 aa)    
Predicted Functional Partners:
RSAG_02176
Uncharacterized protein (230 aa)
              0.904
RSAG_03268
Uncharacterized protein (163 aa)
         
  0.774
RSAG_02156
Uncharacterized protein (749 aa)
   
   
  0.735
RSAG_01079
Competence/damage-inducible protein CinA domain (187 aa)
           
  0.616
RSAG_02178
Uncharacterized protein (144 aa)
              0.609
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (119 aa)
 
        0.595
RSAG_01031
Ribosomal protein S1 (358 aa)
 
          0.537
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (211 aa)
 
        0.536
RSAG_02944
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
 
          0.513
RSAG_03300
Uncharacterized protein (302 aa)
 
          0.505
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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