STRINGSTRING
RSAG_02194 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02194" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02194Uncharacterized protein (126 aa)    
Predicted Functional Partners:
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
              0.628
RSAG_00063
Ferrous iron transport protein B ; Fe(2+) uptake system, probably driven by GTP (719 aa)
 
     
  0.540
RSAG_02196
Uncharacterized protein (254 aa)
              0.524
RSAG_00061
Uncharacterized protein (89 aa)
       
  0.477
RSAG_03022
Uncharacterized protein (400 aa)
         
  0.476
RSAG_00921
Ferrous iron transport protein B ; Fe(2+) uptake system, probably driven by GTP (779 aa)
         
  0.476
RSAG_02303
Uncharacterized protein (261 aa)
         
  0.444
metN
Methionine import ATP-binding protein MetN ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (351 aa)
       
      0.435
serC
Phosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (360 aa)
              0.426
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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