STRINGSTRING
RSAG_02196 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02196" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02196Uncharacterized protein (254 aa)    
Predicted Functional Partners:
RSAG_01687
Uncharacterized protein (188 aa)
   
          0.774
RSAG_00012
Uncharacterized protein (217 aa)
   
          0.773
RSAG_00837
Sigma-E processing peptidase SpoIIGA (285 aa)
   
          0.767
RSAG_02658
Uncharacterized protein (122 aa)
   
          0.763
RSAG_00847
Uncharacterized protein (409 aa)
   
          0.753
RSAG_02628
Uncharacterized protein (415 aa)
   
          0.747
RSAG_02137
Uncharacterized protein (365 aa)
   
          0.741
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
              0.724
RSAG_02671
Uncharacterized protein (279 aa)
   
          0.721
RSAG_01898
Uncharacterized protein (353 aa)
   
          0.719
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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