STRINGSTRING
RSAG_02207 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02207" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02207Uncharacterized protein (395 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
   
  0.963
RSAG_00212
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
   
  0.944
hisC
Imidazole acetol-phosphate transaminase (351 aa)
   
 
  0.903
RSAG_00725
Homoserine dehydrogenase (431 aa)
 
  0.891
RSAG_03065
Chorismate mutase (376 aa)
 
 
  0.891
RSAG_02237
Homoserine dehydrogenase (404 aa)
 
  0.888
RSAG_01091
Uncharacterized protein (363 aa)
       
  0.867
ldh
L-lactate dehydrogenase (316 aa)
   
 
  0.861
RSAG_01234
Diaminopimelate decarboxylase (426 aa)
 
 
  0.838
RSAG_00085
Citrate synthase (466 aa)
 
 
  0.837
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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