STRINGSTRING
RSAG_02213 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02213" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02213Uncharacterized protein (538 aa)    
Predicted Functional Partners:
RSAG_00406
PTS system, Fru family, IIC component (637 aa)
       
  0.926
RSAG_01949
Uncharacterized protein (337 aa)
 
   
  0.886
RSAG_01909
PTS system, beta-glucoside-specific IIABC component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (628 aa)
   
   
  0.862
RSAG_01544
Uncharacterized protein (358 aa)
 
   
  0.852
RSAG_01943
Uncharacterized protein (370 aa)
 
   
  0.835
RSAG_03402
Uncharacterized protein (534 aa)
 
 
  0.819
RSAG_03387
Xylulokinase (485 aa)
 
 
  0.815
RSAG_01755
Rhamnulokinase (466 aa)
   
 
  0.786
RSAG_00350
Uncharacterized protein (324 aa)
       
  0.782
RSAG_02285
Chlorophyll synthesis pathway, bchC (342 aa)
       
  0.771
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (9%) [HD]