STRINGSTRING
RSAG_02221 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02221" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02221Uncharacterized protein (208 aa)    
Predicted Functional Partners:
RSAG_03182
DNA-directed DNA polymerase (1155 aa)
   
 
  0.884
RSAG_03291
DNA polymerase III, delta’ subunit (329 aa)
     
 
  0.848
RSAG_02637
DNA polymerase III, subunit gamma and tau (539 aa)
     
 
  0.848
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (110 aa)
 
   
  0.794
RSAG_02404
Uncharacterized protein (170 aa)
 
          0.775
RSAG_03131
Uncharacterized protein (516 aa)
   
          0.773
RSAG_03271
CotS family spore coat protein (329 aa)
   
          0.765
RSAG_03233
Uncharacterized protein (573 aa)
   
          0.746
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
   
   
  0.740
RSAG_03076
Uncharacterized protein (422 aa)
   
          0.728
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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