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dapB protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"dapB" - 4-hydroxy-tetrahydrodipicolinate reductase in Ruminococcus sp. 5139BFAA
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
dapB4-hydroxy-tetrahydrodipicolinate reductase ; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (253 aa)    
Predicted Functional Partners:
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (297 aa)
 
 
  0.997
RSAG_02737
N-acetylneuraminate lyase (304 aa)
 
 
  0.902
dapL
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (404 aa)
   
 
  0.872
RSAG_02238
Aspartokinase (402 aa)
 
  0.866
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (284 aa)
 
   
  0.852
RSAG_01747
Aspartokinase (439 aa)
 
 
  0.849
RSAG_02994
Aspartate-semialdehyde dehydrogenase (361 aa)
 
   
  0.848
RSAG_01234
Diaminopimelate decarboxylase (426 aa)
 
   
  0.840
RSAG_02360
Diaminopimelate epimerase (151 aa)
 
   
  0.824
RSAG_03473
Uncharacterized protein (519 aa)
   
 
  0.806
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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