STRINGSTRING
RSAG_02253 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02253" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02253Uncharacterized protein (436 aa)    
Predicted Functional Partners:
RSAG_02252
Uncharacterized protein (833 aa)
 
          0.926
RSAG_02251
Uncharacterized protein (248 aa)
 
          0.879
RSAG_02512
Uncharacterized protein (474 aa)
 
   
 
0.747
RSAG_02518
Uncharacterized protein (751 aa)
 
   
    0.727
RSAG_02079
Uncharacterized protein (431 aa)
 
          0.587
RSAG_03411
Uncharacterized protein (455 aa)
   
          0.568
RSAG_02078
Uncharacterized protein (1039 aa)
 
        0.550
RSAG_03473
Uncharacterized protein (519 aa)
     
      0.417
RSAG_02207
Uncharacterized protein (395 aa)
     
      0.417
dapL
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (404 aa)
     
      0.417
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (6%) [HD]