STRINGSTRING
RSAG_02258 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02258" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02258Uncharacterized protein (383 aa)    
Predicted Functional Partners:
RSAG_02259
Diguanylate cyclase (GGDEF) domain-containing protein (600 aa)
  0.970
RSAG_02666
Uncharacterized protein (227 aa)
 
  0.906
RSAG_02973
Uncharacterized protein (289 aa)
 
   
  0.879
RSAG_02158
Uncharacterized protein (483 aa)
  0.873
RSAG_00577
Uncharacterized protein (361 aa)
   
  0.864
RSAG_01268
Uncharacterized protein (309 aa)
   
  0.857
RSAG_00367
Uncharacterized protein (494 aa)
  0.844
RSAG_01829
Uncharacterized protein (470 aa)
  0.842
RSAG_04548
Uncharacterized protein (383 aa)
   
  0.838
RSAG_01993
Uncharacterized protein (447 aa)
  0.830
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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