STRINGSTRING
RSAG_02350 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02350" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02350Uncharacterized protein (142 aa)    
Predicted Functional Partners:
RSAG_03358
Uncharacterized protein (398 aa)
 
 
      0.890
RSAG_02349
Anaerobic ribonucleoside-triphosphate reductase (792 aa)
              0.738
RSAG_00039
Uncharacterized protein (147 aa)
   
          0.629
RSAG_00038
Uncharacterized protein (662 aa)
   
          0.599
RSAG_02351
Rrf2 family protein (144 aa)
              0.520
RSAG_00212
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
              0.441
hflX
GTP-binding protein HflX ; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (411 aa)
              0.428
RSAG_02352
Cysteine synthase (309 aa)
              0.406
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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