STRINGSTRING
RSAG_02377 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02377" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02377Uncharacterized protein (248 aa)    
Predicted Functional Partners:
RSAG_02378
Uncharacterized protein (727 aa)
  0.998
RSAG_02897
Uncharacterized protein (671 aa)
  0.995
RSAG_00502
Uncharacterized protein (418 aa)
  0.987
RSAG_04674
Uncharacterized protein (386 aa)
  0.971
RSAG_01498
Uncharacterized protein (635 aa)
  0.971
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (324 aa)
     
 
  0.928
RSAG_02380
Ribulose-phosphate 3-epimerase (223 aa)
 
   
  0.928
RSAG_02375
Ribosomal RNA small subunit methyltransferase B (450 aa)
   
   
  0.923
rlmN
tRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (346 aa)
   
   
  0.923
RSAG_02379
Ribosome small subunit-dependent GTPase A ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (292 aa)
         
  0.922
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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