STRINGSTRING
RSAG_02388 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02388" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02388Uncharacterized protein (578 aa)    
Predicted Functional Partners:
RSAG_02391
Uncharacterized protein (365 aa)
  0.991
RSAG_00783
Cell division protein FtsW (398 aa)
  0.986
RSAG_00132
Uncharacterized protein (386 aa)
  0.980
RSAG_01977
1A family penicillin-binding protein (863 aa)
 
0.973
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (467 aa)
 
  0.958
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase ; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (356 aa)
 
  0.951
RSAG_02370
UDP-N-acetylmuramyl-tripeptide synthetase (491 aa)
   
  0.940
RSAG_01068
Uncharacterized protein (399 aa)
 
 
  0.936
RSAG_01061
Uncharacterized protein (421 aa)
 
 
  0.934
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (451 aa)
 
 
  0.932
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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