STRINGSTRING
RSAG_02395 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02395" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02395Uncharacterized protein (109 aa)    
Predicted Functional Partners:
RSAG_03233
Uncharacterized protein (573 aa)
   
          0.775
RSAG_03076
Uncharacterized protein (422 aa)
   
          0.769
RSAG_02313
Uncharacterized protein (573 aa)
   
          0.752
RSAG_02658
Uncharacterized protein (122 aa)
   
          0.730
RSAG_01037
Oxaloacetate decarboxylase gamma chain (234 aa)
   
          0.704
RSAG_01078
Uncharacterized protein (90 aa)
   
          0.620
RSAG_00173
Sporulation protein YqfC (104 aa)
   
          0.608
RSAG_03275
Spore cortex biosynthesis protein YabQ (154 aa)
   
          0.597
RSAG_03271
CotS family spore coat protein (329 aa)
   
          0.574
RSAG_02221
Uncharacterized protein (208 aa)
   
          0.542
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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