STRINGSTRING
RSAG_02400 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02400" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02400Uncharacterized protein (295 aa)    
Predicted Functional Partners:
RSAG_04629
Uncharacterized protein (333 aa)
 
0.989
RSAG_02399
Uncharacterized protein (393 aa)
 
 
  0.987
RSAG_02604
Uncharacterized protein (271 aa)
   
   
  0.638
RSAG_03439
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region (219 aa)
         
  0.610
RSAG_03438
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region (225 aa)
         
  0.610
RSAG_03436
Uncharacterized protein (330 aa)
         
  0.577
RSAG_04631
Uncharacterized protein (268 aa)
         
  0.577
RSAG_04762
Uncharacterized protein (280 aa)
         
  0.577
potA
Spermidine/putrescine import ATP-binding protein PotA ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (347 aa)
 
     
    0.480
RSAG_03437
Uncharacterized protein (251 aa)
     
  0.470
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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