STRINGSTRING
RSAG_02405 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02405" - TIGR01212 family radical SAM protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02405TIGR01212 family radical SAM protein (308 aa)    
Predicted Functional Partners:
RSAG_02406
Uncharacterized protein (229 aa)
              0.862
RSAG_02404
Uncharacterized protein (170 aa)
              0.780
RSAG_01291
Uncharacterized protein (187 aa)
 
          0.560
RSAG_02407
Uncharacterized protein (176 aa)
         
  0.541
RSAG_02408
Uncharacterized protein (94 aa)
              0.540
RSAG_02403
Uncharacterized protein (439 aa)
              0.457
RSAG_03414
Thioredoxin reductase (318 aa)
              0.438
RSAG_02288
Methylated-DNA-[protein]-cysteine S-methyltransferase (171 aa)
              0.438
dapB
4-hydroxy-tetrahydrodipicolinate reductase ; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (253 aa)
              0.438
RSAG_01865
Glutamine phosphoribosylpyrophosphate amidotransferase (471 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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