STRINGSTRING
RSAG_02419 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02419" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02419Uncharacterized protein (331 aa)    
Predicted Functional Partners:
RSAG_02125
TDP-4-keto-6-deoxy-D-glucose transaminase (376 aa)
     
    0.701
RSAG_02455
Uncharacterized protein (322 aa)
 
 
  0.689
RSAG_02420
Uncharacterized protein (303 aa)
              0.684
RSAG_00350
Uncharacterized protein (324 aa)
   
 
  0.662
RSAG_01978
Uncharacterized protein (314 aa)
   
   
    0.658
RSAG_01661
Glycerol-3-phosphate cytidylyltransferase (435 aa)
   
 
  0.653
RSAG_01657
Uncharacterized protein (245 aa)
   
 
  0.650
RSAG_01334
Uncharacterized protein (235 aa)
   
 
  0.650
RSAG_00956
Uncharacterized protein (251 aa)
   
 
  0.650
RSAG_00678
Uncharacterized protein (267 aa)
   
 
  0.650
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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