STRINGSTRING
RSAG_02421 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02421" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02421Uncharacterized protein (740 aa)    
Predicted Functional Partners:
RSAG_02418
Lactase (1060 aa)
 
   
  0.921
RSAG_03198
Beta-galactosidase (674 aa)
 
   
  0.907
RSAG_01529
Beta-galactosidase (672 aa)
 
   
  0.906
RSAG_01535
Uncharacterized protein (692 aa)
 
   
  0.898
RSAG_02420
Uncharacterized protein (303 aa)
 
     
  0.887
RSAG_01952
Lactase (1013 aa)
       
  0.847
RSAG_00417
Lactase (1012 aa)
       
  0.847
RSAG_01527
Uncharacterized protein (412 aa)
 
   
  0.839
RSAG_02506
Invertase (494 aa)
 
   
  0.806
RSAG_03205
Sucrose-6-phosphate hydrolase (479 aa)
 
   
  0.806
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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