STRINGSTRING
RSAG_02455 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02455" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02455Uncharacterized protein (322 aa)    
Predicted Functional Partners:
RSAG_03412
Uncharacterized protein (291 aa)
 
 
  0.886
RSAG_01058
Uncharacterized protein (280 aa)
   
 
  0.868
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
 
  0.804
RSAG_02125
TDP-4-keto-6-deoxy-D-glucose transaminase (376 aa)
 
 
  0.798
RSAG_02285
Chlorophyll synthesis pathway, bchC (342 aa)
   
  0.785
RSAG_01948
Chlorophyll synthesis pathway, bchC (338 aa)
   
  0.785
RSAG_01776
Uncharacterized protein (389 aa)
   
  0.785
RSAG_00662
Uncharacterized protein (339 aa)
   
  0.785
RSAG_00676
Uncharacterized protein (257 aa)
 
 
    0.743
RSAG_02070
Uncharacterized protein (823 aa)
   
 
  0.706
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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