STRINGSTRING
RSAG_02456 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02456" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02456Uncharacterized protein (65 aa)    
Predicted Functional Partners:
RSAG_02221
Uncharacterized protein (208 aa)
   
          0.638
RSAG_02455
Uncharacterized protein (322 aa)
              0.562
RSAG_01879
Uncharacterized protein (256 aa)
   
          0.545
RSAG_04601
Uncharacterized protein (115 aa)
   
          0.543
RSAG_02457
Uncharacterized protein (61 aa)
              0.542
RSAG_03271
CotS family spore coat protein (329 aa)
   
          0.516
RSAG_02178
Uncharacterized protein (144 aa)
   
          0.491
RSAG_02395
Uncharacterized protein (109 aa)
   
          0.484
RSAG_00766
Stage III sporulation protein AE (409 aa)
   
          0.457
RSAG_02404
Uncharacterized protein (170 aa)
   
          0.448
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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