STRINGSTRING
RSAG_02473 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02473" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02473Uncharacterized protein (155 aa)    
Predicted Functional Partners:
RSAG_02472
Uncharacterized protein (720 aa)
         
  0.593
RSAG_02471
Uncharacterized protein (612 aa)
         
  0.593
RSAG_00948
MATE efflux family protein (581 aa)
 
     
  0.544
RSAG_03049
DNA topoisomerase (ATP-hydrolyzing) (748 aa)
   
 
 
  0.502
RSAG_00992
MATE efflux family protein (458 aa)
 
     
  0.497
RSAG_00850
MATE efflux family protein (453 aa)
 
     
  0.491
RSAG_03352
Uncharacterized protein (920 aa)
       
  0.486
RSAG_00201
Selenium-dependent molybdenum hydroxylase 1 (860 aa)
       
  0.486
RSAG_02474
Uncharacterized protein (294 aa)
              0.478
RSAG_02331
Uncharacterized protein (208 aa)
     
 
  0.472
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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