STRINGSTRING
RSAG_02478 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02478" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02478Uncharacterized protein (57 aa)    
Predicted Functional Partners:
clpB
Chaperone protein ClpB ; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE (863 aa)
              0.859
RSAG_02480
Uncharacterized protein (100 aa)
              0.593
RSAG_00695
Ketopantoate reductase ; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (311 aa)
   
          0.509
RSAG_02483
Uncharacterized protein (78 aa)
              0.467
RSAG_02482
Uncharacterized protein (156 aa)
              0.467
RSAG_02481
Uncharacterized protein (80 aa)
              0.467
RSAG_02954
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (326 aa)
   
          0.427
RSAG_00662
Uncharacterized protein (339 aa)
   
          0.406
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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