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RSAG_02536 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02536" - MATE efflux family protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02536MATE efflux family protein (453 aa)    
Predicted Functional Partners:
RSAG_02537
Uncharacterized protein (150 aa)
 
          0.962
RSAG_02535
UPF0597 protein RSAG_02535 (425 aa)
              0.634
RSAG_02538
Uncharacterized protein (310 aa)
              0.562
RSAG_03284
1-acyl-sn-glycerol-3-phosphate acyltransferase (237 aa)
     
    0.546
RSAG_03133
1-acyl-sn-glycerol-3-phosphate acyltransferase (248 aa)
     
    0.546
RSAG_02539
Cytokinin riboside 5’-monophosphate phosphoribohydrolase (180 aa)
   
        0.492
RSAG_03244
Single-stranded DNA-binding protein (153 aa)
       
    0.469
RSAG_02221
Uncharacterized protein (208 aa)
       
    0.469
RSAG_02063
Sigma-70 family RNA polymerase sigma factor (191 aa)
   
          0.454
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (941 aa)
   
        0.447
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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