STRINGSTRING
RSAG_02537 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02537" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02537Uncharacterized protein (150 aa)    
Predicted Functional Partners:
RSAG_02536
MATE efflux family protein (453 aa)
 
          0.962
RSAG_02535
UPF0597 protein RSAG_02535 (425 aa)
              0.634
RSAG_02538
Uncharacterized protein (310 aa)
              0.562
RSAG_00635
Uncharacterized protein (546 aa)
   
          0.562
RSAG_02183
Uncharacterized protein (439 aa)
   
          0.513
RSAG_02539
Cytokinin riboside 5’-monophosphate phosphoribohydrolase (180 aa)
              0.483
RSAG_00952
No annotation available (154 aa)
   
          0.483
RSAG_02086
Uncharacterized protein (184 aa)
   
          0.479
RSAG_01059
Uncharacterized protein (302 aa)
   
          0.473
RSAG_02504
Uncharacterized protein (838 aa)
   
          0.441
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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