STRINGSTRING
RSAG_02540 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02540" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02540Uncharacterized protein (260 aa)    
Predicted Functional Partners:
RSAG_02541
Uncharacterized protein (190 aa)
 
  0.996
ecfT
Energy-coupling factor transporter transmembrane protein EcfT ; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (267 aa)
  0.973
RSAG_02542
Cobalamin biosynthesis protein CbiM (334 aa)
 
   
  0.958
RSAG_02301
Uncharacterized protein (194 aa)
 
   
  0.842
RSAG_03446
Uncharacterized protein (197 aa)
 
   
  0.824
RSAG_04588
Uncharacterized protein (355 aa)
 
 
 
0.710
RSAG_01514
Sulfate ABC transporter, ATP-binding protein (352 aa)
 
 
 
0.703
RSAG_00348
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (333 aa)
 
   
 
0.669
RSAG_03213
Uncharacterized protein (220 aa)
   
0.650
metN
Methionine import ATP-binding protein MetN ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (351 aa)
   
 
 
0.637
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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