STRINGSTRING
RSAG_02541 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02541" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02541Uncharacterized protein (190 aa)    
Predicted Functional Partners:
RSAG_02540
Uncharacterized protein (260 aa)
 
  0.996
RSAG_02542
Cobalamin biosynthesis protein CbiM (334 aa)
 
   
  0.966
RSAG_02039
Energy-coupling factor transporter ATP-binding protein EcfA ; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (358 aa)
   
  0.926
RSAG_00424
Uncharacterized protein (215 aa)
 
  0.919
RSAG_02040
Energy-coupling factor transporter ATP-binding protein EcfA ; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (281 aa)
   
  0.888
RSAG_03446
Uncharacterized protein (197 aa)
       
  0.783
RSAG_02301
Uncharacterized protein (194 aa)
       
  0.783
RSAG_04588
Uncharacterized protein (355 aa)
 
 
    0.680
RSAG_00412
Uncharacterized protein (588 aa)
 
   
  0.663
RSAG_01514
Sulfate ABC transporter, ATP-binding protein (352 aa)
   
 
    0.633
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (11%) [HD]