STRINGSTRING
RSAG_02550 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02550" - Magnesium transporter MgtE in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02550Magnesium transporter MgtE ; Acts as a magnesium transporter (464 aa)    
Predicted Functional Partners:
RSAG_03022
Uncharacterized protein (400 aa)
 
   
  0.533
RSAG_01288
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (299 aa)
   
        0.514
RSAG_00696
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (349 aa)
   
        0.514
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (290 aa)
   
        0.452
RSAG_02885
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (276 aa)
   
        0.447
RSAG_00521
Protein-export membrane protein SecD ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (802 aa)
   
 
  0.440
RSAG_00406
PTS system, Fru family, IIC component (637 aa)
         
  0.438
RSAG_03301
Uncharacterized protein (237 aa)
              0.438
era
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (302 aa)
              0.438
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (247 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (9%) [HD]