STRINGSTRING
RSAG_02560 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02560" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02560Uncharacterized protein (512 aa)    
Predicted Functional Partners:
RSAG_02450
Uncharacterized protein (555 aa)
 
          0.778
RSAG_02448
Uncharacterized protein (573 aa)
   
          0.778
RSAG_02899
Uncharacterized protein (1018 aa)
   
          0.777
RSAG_02561
Uncharacterized protein (263 aa)
              0.718
RSAG_02559
Uncharacterized protein (271 aa)
 
          0.699
RSAG_02558
Uncharacterized protein (180 aa)
              0.476
RSAG_02557
Uncharacterized protein (606 aa)
              0.442
RSAG_02453
Uncharacterized protein (316 aa)
 
       
0.427
RSAG_03139
Uncharacterized protein (803 aa)
   
          0.422
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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