STRINGSTRING
RSAG_02563 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02563" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02563Uncharacterized protein (506 aa)    
Predicted Functional Partners:
RSAG_02564
Uncharacterized protein (213 aa)
 
          0.951
RSAG_02565
Acetylornithine aminotransferase (405 aa)
 
 
  0.768
RSAG_02587
Uncharacterized protein (552 aa)
   
  0.696
RSAG_01884
Uncharacterized protein (554 aa)
   
  0.696
RSAG_01882
Uncharacterized protein (556 aa)
   
  0.696
RSAG_03280
Uncharacterized protein (711 aa)
     
  0.695
RSAG_04756
Uncharacterized protein (624 aa)
     
  0.695
RSAG_00091
Uncharacterized protein (577 aa)
     
  0.695
RSAG_00406
PTS system, Fru family, IIC component (637 aa)
           
  0.615
trpD
Anthranilate phosphoribosyltransferase ; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (336 aa)
       
      0.610
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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