STRINGSTRING
RSAG_02592 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02592" - CRISPR-associated helicase cas3 in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02592CRISPR-associated helicase cas3 (850 aa)    
Predicted Functional Partners:
RSAG_02591
CRISPR-associated endonuclease cas1 (120 aa)
 
   
  0.972
RSAG_02593
CRISPR-associated protein cas5, subtype I-b/hmari (245 aa)
 
          0.937
RSAG_02590
CRISPR-associated endoribonuclease Cas2 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (96 aa)
 
          0.936
RSAG_02595
CRISPR-associated protein cas8b/csh1, subtype I-b/hmari (584 aa)
 
          0.915
RSAG_02594
Uncharacterized protein (262 aa)
 
          0.915
RSAG_02596
CRISPR-associated endoribonuclease cas6 (234 aa)
 
          0.903
cas1
CRISPR-associated endonuclease Cas1 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (333 aa)
 
   
  0.888
RSAG_04730
CRISPR-associated endoribonuclease Cas2 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (64 aa)
         
  0.474
RSAG_01807
Uncharacterized protein (305 aa)
              0.438
RSAG_00274
CRISPR-associated endoribonuclease cas6 (246 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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