STRINGSTRING
RSAG_02598 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02598" - Amidohydrolase in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
RSAG_02598Amidohydrolase (389 aa)    
Predicted Functional Partners:
RSAG_02360
Diaminopimelate epimerase (151 aa)
   
 
  0.813
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (284 aa)
   
 
  0.813
RSAG_02599
ATP-dependent DNA helicase RecQ (629 aa)
              0.792
RSAG_02600
Uncharacterized protein (295 aa)
              0.712
RSAG_02087
Uncharacterized protein (452 aa)
   
 
  0.706
RSAG_04675
Uncharacterized protein (467 aa)
   
 
  0.706
RSAG_03473
Uncharacterized protein (519 aa)
   
 
    0.698
RSAG_02207
Uncharacterized protein (395 aa)
   
 
    0.698
dapL
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (404 aa)
   
 
    0.698
RSAG_00192
M20/DapE family protein YgeY (436 aa)
   
 
  0.640
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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